The detailed information of tRNA gene sequence


Sequence ID>C018209
Genome IDCP000084
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter ubique HTCC1062 [CP000084]
Start position on genome 440216
End posion on genome 440305
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
accagtaact
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTTTAAAGCGCACGCTTGGAAAGTGTGTGTACTGTTAAAGGTA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
ttaatttatt
Secondary structure (Cloverleaf model)
>C018209	Ser	GGA
                   t      GCCA ttaatttatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      T T A        G     TGTACTGTTAAAGGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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