The detailed information of tRNA gene sequence


Sequence ID>C018222
Genome IDCP000084
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter ubique HTCC1062 [CP000084]
Start position on genome 1087868
End posion on genome 1087943
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aatcgtttat
tRNA gene sequence 
GCCCTTGTAGCTCAGCTGGTAGAGCAATTGATTTGTAATCAATAGGTCCGCGGTTCGACT
CCGTGCGGGGGCACCA
Downstream region at tRNA end position 
tcacttaatt
Secondary structure (Cloverleaf model)
>C018222	Thr	TGT
                   t      ACCA tcacttaatt
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     T + G
                     G - C          T C
                    T     G T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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