The detailed information of tRNA gene sequence


Sequence ID>C018227
Genome IDCP000084
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter ubique HTCC1062 [CP000084]
Start position on genome 1085508
End posion on genome 1085433
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaactctat
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGTGCCGGTCTCCAAAACCGGAGGTTGAGGGTTCGATT
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
ataagctaaa
Secondary structure (Cloverleaf model)
>C018227	Trp	CCA
                   t      GCCA ataagctaaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK