The detailed information of tRNA gene sequence


Sequence ID>C018566
Genome IDCP000053
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia felis URRWXCal2 URRWXCal2; California 2 [CP000053]
Start position on genome 830721
End posion on genome 830796
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atttgttatt
tRNA gene sequence 
GGGGTCATAGCTCAGTTGGTAGAGTGCTTGAATGGCATTCAAGAGGTCGAGGGTTCGATT
CCCTCTGGCTCCACCA
Downstream region at tRNA end position 
tgtcttattt
Secondary structure (Cloverleaf model)
>C018566	Ala	GGC
                   t      ACCA tgtcttattt
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     C - G
                     A - T          T T
                    T     C T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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