The detailed information of tRNA gene sequence


Sequence ID>C018571
Genome IDCP000053
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia felis URRWXCal2 URRWXCal2; California 2 [CP000053]
Start position on genome 1190869
End posion on genome 1190944
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
tctcagcctt
tRNA gene sequence 
GCCGATGTAGCTCAGCTGGTAGAGCGGTGCATTCGTAATGCGTAGGTCTGGGGTTCAAAT
CCCCACATTGGCACCA
Downstream region at tRNA end position 
ttttctaaat
Secondary structure (Cloverleaf model)
>C018571	Thr	CGT
                   t      ACCA ttttctaaat
                     G - C
                     C - G
                     C - G
                     G + T
                     A - T
                     T - A
                     G - C          T A
                    T     A C C C C     A
      C G A        A      | | | | |     A
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    T + G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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