The detailed information of tRNA gene sequence


Sequence ID>C018581
Genome IDCP000053
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia felis URRWXCal2 URRWXCal2; California 2 [CP000053]
Start position on genome 887642
End posion on genome 887568
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
aagtctatat
tRNA gene sequence 
TGGGATGTCGCCAAGTGGTAAGGCAACGGTTTTTGGTATCGTCATTCGGAGGTTCGAATC
CTCCCGTCCCAGCCA
Downstream region at tRNA end position 
ttcgtcaata
Secondary structure (Cloverleaf model)
>C018581	Gln	TTG
                   t      GCCA ttcgtcaata
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     G - C          T A
                    T     C C T C C     A
        G A        C      | | | | |     G
      T     A C C G       G G A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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