The detailed information of tRNA gene sequence


Sequence ID>C018646
Genome IDCP000431
Search identical group
Phylum/ClassActinomycetota
SpeciesRhodococcus jostii RHA1 [CP000431]
Start position on genome 4346329
End posion on genome 4346420
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accaccccag
tRNA gene sequence 
GGAGGCGTGCCAGAGCGGCCGAATGGGACTCACTGCTAATGAGTTGTCCCTTTTACGAGG
GACCGGAGGTTCAAATCCTCTCGCCTCCGCCA
Downstream region at tRNA end position 
caccgggcct
Secondary structure (Cloverleaf model)
>C018646	Ser	GCT
                   g      GCCA caccgggcct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     A
    G       G A C C       G G A G G     C
    G         | | |                 T T
    C       A T G G
      C G A        G     TGTCCCTTTTACGAGGGACC
                    A - T
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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