The detailed information of tRNA gene sequence


Sequence ID>C019075
Genome IDAJ235269
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia prowazekii [AJ235269]
Start position on genome 293839
End posion on genome 293915
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacattctat
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCAACGGAATCATAATCCGTGTGTCGCGGGTTCAAA
TCCCTCTCCCGCTACCA
Downstream region at tRNA end position 
ttcattcgtc
Secondary structure (Cloverleaf model)
>C019075	Met	CAT
                   t      ACCA ttcattcgtc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        A      |   | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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