The detailed information of tRNA gene sequence


Sequence ID>C019115
Genome IDCP000230
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodospirillum rubrum ATCC 11170 [CP000230]
Start position on genome 1465406
End posion on genome 1465495
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgacccctgc
tRNA gene sequence 
GGAGGGGTGCCAGAGTGGTCGATCGGGGCGGTCTCGAAAACCGTTGTTCCTTCGCGGGAA
CCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
attcaaaaaa
Secondary structure (Cloverleaf model)
>C019115	Ser	CGA
                   c      GCCA attcaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       +   | |                 T T
    T       T C G G
      C G A        G     TGTTCCTTCGCGGGAACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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