The detailed information of tRNA gene sequence


Sequence ID>C019142
Genome IDCP000230
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodospirillum rubrum ATCC 11170 [CP000230]
Start position on genome 3125260
End posion on genome 3125185
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cggccgctgg
tRNA gene sequence 
AGGGGTGTAGCTCAACTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTACGGGTTCAAGT
CCTGTCACCCCTGCCA
Downstream region at tRNA end position 
acggccgtga
Secondary structure (Cloverleaf model)
>C019142	Trp	CCA
                   g      GCCA acggccgtga
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G T C C     A
      C A A        A      | | + | |     A
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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