The detailed information of tRNA gene sequence


Sequence ID>C019354
Genome IDAE017197
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia typhi str. Wilmington [AE017197]
Start position on genome 291448
End posion on genome 291524
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacattctat
tRNA gene sequence 
GGCGGGGTAGCTCAGCTGGTTAGAGCAACGGAATCATAATCCGTGTGTCGTGGGTTCAAA
TCCCTCTCCCGCTACCA
Downstream region at tRNA end position 
tgcattcgtc
Secondary structure (Cloverleaf model)
>C019354	Met	CAT
                   t      ACCA tgcattcgtc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        A      |   | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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