The detailed information of tRNA gene sequence


Sequence ID>C019431
Genome IDCP000252
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesSyntrophus aciditrophicus SB [CP000252]
Start position on genome 79290
End posion on genome 79383
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgattttgc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCGTAACGGGATCGACTCGAAATCGATTTGGGGGCCAAAAGC
TCTCACGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
gttattgctt
Secondary structure (Cloverleaf model)
>C019431	Ser	CGA
                   c      GCCA gttattgctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGGGGGCCAAAAGCTCTCAC
                    A - T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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