The detailed information of tRNA gene sequence


Sequence ID>C019447
Genome IDCP000252
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesSyntrophus aciditrophicus SB [CP000252]
Start position on genome 931834
End posion on genome 931927
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcttccccac
tRNA gene sequence 
GGAAGTGCCAAGGTCACTGGTGGGCCTCCCGGACTTCAAATCCGGTGTGGGGCGCTAAAA
CCGTCCCAGGTGGGTTCGATTCCCATGCACTTCCgcca
Downstream region at tRNA end position 
tttttactca
Secondary structure (Cloverleaf model)
>C019447	SeC	TCA
                   c      gcca tttttactca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    C     T A C C C     A
      C A C        A      + | | | |     G
    T       T G G A       G T G G G     C
    G       + | | |                 T T
    G       G C C T
      T G G        C     TGTGGGGCGCTAAAACCGTCCCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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