The detailed information of tRNA gene sequence


Sequence ID>C021123
Genome IDCP000100
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus elongatus PCC 7942 = FACHB-805 [CP000100]
Start position on genome 166532
End posion on genome 166608
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atctggctgg
tRNA gene sequence 
CGCGGGGTAGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAGAGGTTCAAA
TCCTCTCCCCGCCACCA
Downstream region at tRNA end position 
actaaagagt
Secondary structure (Cloverleaf model)
>C021123	Met	CAT
                   g      ACCA actaaagagt
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      C G A        A      | | | | |     A
    C       C G A G       A G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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