The detailed information of tRNA gene sequence


Sequence ID>C021149
Genome IDCP000100
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus elongatus PCC 7942 = FACHB-805 [CP000100]
Start position on genome 2676678
End posion on genome 2676606
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agcgaaatct
tRNA gene sequence 
CCAGGGTTGGCCGAGCGGATTAGGCAGCGAACTCATAATTCGCTTTAGGCGGGTTCAACT
CCTGCACCCTGGAttc
Downstream region at tRNA end position 
tgacttcaca
Secondary structure (Cloverleaf model)
>C021149	Met	CAT
                   t      Attc tgacttcaca
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T C
                    T     C G T C C     A
      C G A        G      | | + | |     A
    G       G C C G       G C G G G     C
    G         | | |                 T T
    A       A G G C
      T T          A     TTTAG
                    G - C
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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