The detailed information of tRNA gene sequence


Sequence ID>C024107
Genome IDCP000159
Search identical group
Phylum/ClassRhodothermota
SpeciesSalinibacter ruber DSM 13855 [CP000159]
Start position on genome 1352109
End posion on genome 1352181
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tcctactttc
tRNA gene sequence 
GGGGCCATAGCTCAGTCGGTAGAGCGCTTGCATGGCATGCAAGAGGTCCGGGGTTCGAAT
CCCCGTGGCTCCActt
Downstream region at tRNA end position 
ttgggtgccc
Secondary structure (Cloverleaf model)
>C024107	Ala	GGC
                   c      Actt ttgggtgccc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     G C C C C     A
      T G A        A      | | | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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