The detailed information of tRNA gene sequence


Sequence ID>C024135
Genome IDCP000159
Search identical group
Phylum/ClassRhodothermota
SpeciesSalinibacter ruber DSM 13855 [CP000159]
Start position on genome 1923016
End posion on genome 1922925
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgacattcac
tRNA gene sequence 
GGTGGGGTGGCAGAGCCTGGTTGAATGCACCGGTCTCGAAAACCGGAGGGCCCTCACGGG
TCCCGGGGGTTCAAATCCCTCCCCCACCGCCG
Downstream region at tRNA end position 
acctacactt
Secondary structure (Cloverleaf model)
>C024135	Ser	CGA
                   c      GCCG acctacactt
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     A
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    T T G A        A     AGGGCCCTCACGGGTCCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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