The detailed information of tRNA gene sequence


Sequence ID>C024139
Genome IDCP000159
Search identical group
Phylum/ClassRhodothermota
SpeciesSalinibacter ruber DSM 13855 [CP000159]
Start position on genome 520260
End posion on genome 520184
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acggtgaccg
tRNA gene sequence 
GGGCCCGTAGCTCAGTTGGTTAGAGCCGCCGACTCATAATCGGCTGGTCGCAGGTTCGAG
CCCTGCCGGGCCCACCC
Downstream region at tRNA end position 
ctcgtgcccg
Secondary structure (Cloverleaf model)
>C024139	Met	CAT
                   g      ACCC ctcgtgcccg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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