The detailed information of tRNA gene sequence


Sequence ID>C025068
Genome IDCP000435
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus sp. CC9311 [CP000435]
Start position on genome 1143485
End posion on genome 1143399
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttgcctcca
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGTTTATGGCTCTGGTCTTGAAAACCAGCGTGTCTGCAAGGGCA
CCGTCGGTTCGAATCCGACCCTCTCCGttc
Downstream region at tRNA end position 
aatagcaaag
Secondary structure (Cloverleaf model)
>C025068	Ser	TGA
                   a      Gttc aatagcaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A G C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T C G G     C
    G       + | + |                 T T
    T       T G G C
      T T A        T     CGTGTCTGCAAGGGCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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