The detailed information of tRNA gene sequence


Sequence ID>C025500
Genome IDAE017226
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema denticola ATCC 35405 [AE017226]
Start position on genome 1202691
End posion on genome 1202619
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagctcttac
tRNA gene sequence 
GGCGGTATAGCTCAGTTGGCAGAGCAAACGGCTCATATCCGTTAGGTCATAGGTTCAAGC
CCTATTGCCGCTAatc
Downstream region at tRNA end position 
ttttttaaag
Secondary structure (Cloverleaf model)
>C025500	Met	CAT
                   c      Aatc ttttttaaag
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     A - T          C G
                    T     T A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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