The detailed information of tRNA gene sequence


Sequence ID>C025629
Genome IDCP000088
Search identical group
Phylum/ClassActinomycetota
SpeciesThermobifida fusca YX [CP000088]
Start position on genome 106795
End posion on genome 106706
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atgcccgcaa
tRNA gene sequence 
GGAGGGTTCGCATAGCGGCCGAGTGCGACGCTCTTGAAAAGCGTTAGGTCGGTAGCCCCG
GCCTCGTGGGTTCAAATCCCACACCCTCCGcgc
Downstream region at tRNA end position 
aaaccgttgg
Secondary structure (Cloverleaf model)
>C025629	Ser	TGA
                   a      Gcgc aaaccgttgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      C G A        G     TAGGTCGGTAGCCCCGGCCTC
                    A - T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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