The detailed information of tRNA gene sequence


Sequence ID>C025722
Genome IDCP000716
Search identical group
Phylum/ClassThermotogota
SpeciesThermosipho melanesiensis BI429 [CP000716]
Start position on genome 57874
End posion on genome 57799
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttaggtgttt
tRNA gene sequence 
GGGGCCGTAGCTCAATTGGGAGAGCGCTACCATGGCACGGTAGAGGCAGTGGGTTCGAAT
CCCATCGGCTCCACCA
Downstream region at tRNA end position 
gttaaggaag
Secondary structure (Cloverleaf model)
>C025722	Ala	GGC
                   t      ACCA gttaaggaag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T A C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCA
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  A       C
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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