The detailed information of tRNA gene sequence


Sequence ID>C025740
Genome IDAE000520
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum str. Nichols [AE000520]
Start position on genome 540979
End posion on genome 541050
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
gggcgcctgt
tRNA gene sequence 
GCGGGAATAGCTCAGTGGTAGAGCGCCACCTTGCCAAGGTGGAAGTCGCGGGTTCGATCC
CCGTTTCCCGCTttt
Downstream region at tRNA end position 
tcagcgcttt
Secondary structure (Cloverleaf model)
>C025740	Gly	GCC
                   t      Tttt tcagcgcttt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          C T
                    T     T G C C C     A
        G A        A      + | | | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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