The detailed information of tRNA gene sequence


Sequence ID>C025747
Genome IDAE000520
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum str. Nichols [AE000520]
Start position on genome 742467
End posion on genome 742538
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gctgcgcgca
tRNA gene sequence 
GGACGATTAACTCAGTGGTAGAGTGTTACCTTCACACGGTAGAAGTCATCGGTTCAAGTC
CGGTATCGTCCAttt
Downstream region at tRNA end position 
cggggataga
Secondary structure (Cloverleaf model)
>C025747	Val	CAC
                   a      Attt cggggataga
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T G G C C     A
        G A        A      | + | | |     A
      T     C T C A       A T C G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    T + G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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