The detailed information of tRNA gene sequence


Sequence ID>C025752
Genome IDAE000520
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum str. Nichols [AE000520]
Start position on genome 1082583
End posion on genome 1082510
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gccggttttt
tRNA gene sequence 
GGGGATGTAGCTCAGTTGGTTAGAGCGCTTGCATGGCATGCAAGAGGTCAGGGGTTCGAT
TCCCCTCATCTCCAtcg
Downstream region at tRNA end position 
ccgtgtgtga
Secondary structure (Cloverleaf model)
>C025752	Ala	GGC
                   t      Atcg ccgtgtgtga
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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