The detailed information of tRNA gene sequence


Sequence ID>C025759
Genome IDAE000520
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum str. Nichols [AE000520]
Start position on genome 642578
End posion on genome 642506
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggggtttttt
tRNA gene sequence 
GGCGGCATAGCTCAGTTGGTAGAGCACGCGGCTCATATCCGCGCTGTCATAGGTTCAATC
CCTATTGCCGCTAttt
Downstream region at tRNA end position 
ccttgggtga
Secondary structure (Cloverleaf model)
>C025759	Met	CAT
                   t      Attt ccttgggtga
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          C T
                    T     T A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CTGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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