The detailed information of tRNA gene sequence


Sequence ID>C025760
Genome IDAE000520
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum str. Nichols [AE000520]
Start position on genome 642436
End posion on genome 642363
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgcaagttct
tRNA gene sequence 
GGGGGCGTAGCGAAGTTGGTTATCGCGCCAGCCTGTCACGCCGGAGATCGCGGGTTCGAG
CCCCGTCGCTCCCGtct
Downstream region at tRNA end position 
gcgcactgtg
Secondary structure (Cloverleaf model)
>C025760	Asp	GTC
                   t      Gtct gcgcactgtg
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       A G C G       G C G G G     C
    G       | | | |                 T T
    G       T C G C
      T T A        G     AGATC
                    C - G
                    C - G
                    A   C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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