The detailed information of tRNA gene sequence


Sequence ID>C025766
Genome IDAE000520
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum str. Nichols [AE000520]
Start position on genome 24819
End posion on genome 24733
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gctgtttttt
tRNA gene sequence 
GGAGCGGTGCGAGAGTGGTCGAATCGGGCTCCCTGCTAAGGAGTTGCATTCATCCGAGTG
CCGGGGGTTCGAATCCCCCCTGCTCCGgtt
Downstream region at tRNA end position 
tgggggccgg
Secondary structure (Cloverleaf model)
>C025766	Ser	GCT
                   t      Ggtt tgggggccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G G G G G     C
    G         | | |                 T T
    T       A T C G
      C G A        G     TGCATTCATCCGAGTGCC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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