The detailed information of tRNA gene sequence


Sequence ID>C025767
Genome IDAE000520
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum str. Nichols [AE000520]
Start position on genome 24701
End posion on genome 24628
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
ccactccctt
tRNA gene sequence 
GAGACTATAGCTCAGCTGGATAGAGTGTCAGATTGCGGATCTGAAGGTCGACGGTTCGAA
TCCGCCTAGTCTCAtta
Downstream region at tRNA end position 
cgggacttgt
Secondary structure (Cloverleaf model)
>C025767	Arg	GCG
                   t      Atta cgggacttgt
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     T - A
                     A - T          T A
                    T     C C G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G A C G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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