The detailed information of tRNA gene sequence


Sequence ID>C025945
Genome IDAP008226
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus thermophilus HB8 [AP008226]
Start position on genome 1602572
End posion on genome 1602480
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccaaaggctt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGGCACCCTGCTAAGGTGTTGCACCGGGAAAACCG
GTGCCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aaaggcccgg
Secondary structure (Cloverleaf model)
>C025945	Ser	GCT
                   t      GCCA aaaggcccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGCACCGGGAAAACCGGTGCC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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