The detailed information of tRNA gene sequence


Sequence ID>C026162
Genome IDAE003852
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae O1 biovar El Tor str. N16961 [AE003852, AE003853]
Start position on genome 1712371
End posion on genome 1712295
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aaaacagtat
tRNA gene sequence 
GCGTCTATAGCTCAGTTGGTTAGAGCACCACCTTGACATGGTGGGGGTCGGTGGTTCGAG
TCCACTTAGACGCACCA
Downstream region at tRNA end position 
gaatttgttc
Secondary structure (Cloverleaf model)
>C026162	Val	GAC
                   t      ACCA gaatttgttc
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     T - A
                     A - T          T G
                    T     T C A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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