The detailed information of tRNA gene sequence


Sequence ID>C027331
Genome IDAP008229
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesXanthomonas oryzae pv. oryzae MAFF 311018 [AP008229]
Start position on genome 3138955
End posion on genome 3138863
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaaaaaact
tRNA gene sequence 
GGAGCGATGCCCGAGCGGCTGAAGGGGCTCCCCTGCTAAGGGAGTATAGGGTCAAAAGCT
CTATCGAGGGTTCGAATCCCTCTCGCTCCGCCA
Downstream region at tRNA end position 
taaccaacaa
Secondary structure (Cloverleaf model)
>C027331	Ser	GCT
                   t      GCCA taaccaacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TATAGGGTCAAAAGCTCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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