The detailed information of tRNA gene sequence


Sequence ID>C028325
Genome IDAM494475
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi str. Boryong [AM494475]
Start position on genome 116907
End posion on genome 116981
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tatactgtta
tRNA gene sequence 
GCCGCTATAGCTCAGTGGTAGAGCGCATCATTGGTAATGATGAGGTCGGGAGTCCGATTC
TCCTTAGTGGCACCA
Downstream region at tRNA end position 
ctattttatc
Secondary structure (Cloverleaf model)
>C028325	Thr	GGT
                   a      ACCA ctattttatc
                     G - C
                     C - G
                     C - G
                     G + T
                     C - G
                     T - A
                     A - T          T T
                    T     T C C T C     A
        G A        A      + | | | |     G
      T     C T C G       G G G A G     C
      G     | | | |                 T C
      G     G A G C
        T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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