The detailed information of tRNA gene sequence


Sequence ID>C028327
Genome IDAM494475
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesOrientia tsutsugamushi str. Boryong [AM494475]
Start position on genome 1640080
End posion on genome 1640004
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aattattgat
tRNA gene sequence 
GCGTCCTTAGCTCAGTTGAATAGAGCAATAGATTTCTAATCTGTGGGTCAGAGGTTTGAG
TCCTCTAGGACGCGCCA
Downstream region at tRNA end position 
ttatatattc
Secondary structure (Cloverleaf model)
>C028327	Arg	TCT
                   t      GCCA ttatatattc
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A          T G
                    T     T C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G A G G     T
    G       | | | |                 T T
    A       G A G C
      A T A        A     GGGTC
                    A - T
                    T + G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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