The detailed information of tRNA gene sequence


Sequence ID>C028383
Genome IDCP000084
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter ubique HTCC1062 [CP000084]
Start position on genome 41891
End posion on genome 41817
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aaaattcaaa
tRNA gene sequence 
GGGACTGTAGCTCAATAGTAGAGTACTGCATTGACATTGCAGGGGTAGTTGGAGCGTAAC
CAACCAGTCCCACCA
Downstream region at tRNA end position 
ttttcattat
Secondary structure (Cloverleaf model)
>C028383	Val	GAC
                   a      ACCA ttttcattat
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A
                     G - C          A A
                    T     C A A C C     T
        A A        A      | | | | |     G
      T     C T C G       G T T G G     C
      A     | | | +                 A G
      G     G A G T
        T A        A     GGGTA
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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