The detailed information of tRNA gene sequence


Sequence ID>C028515
Genome IDAE000520
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum str. Nichols [AE000520]
Start position on genome 168030
End posion on genome 167949
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
cgcccgctgt
tRNA gene sequence 
GCGGCGGTGGTGGAAGTGGTATACACGCTAGCTCGAGGTGCTAGTGCCGTAAGGCTTGCT
GGTTCAAGTCCAGTCCGCCGCAaag
Downstream region at tRNA end position 
gccccgcggg
Secondary structure (Cloverleaf model)
>C028515	Leu	GAG
                   t      Aaag gccccgcggg
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G A C C     A
      G A A        G      + | | | |     A
    T       G G T G       G C T G G     C
    G         | | |                 T T
    G       A C A C
      T A T        G     TGCCGTAAGGCTT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T
                  C       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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