The detailed information of tRNA gene sequence


Sequence ID>CL00007
Genome IDAM406670
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesAzoarcus olearius BH72 [AM406670]
Start position on genome 3559218
End posion on genome 3559501
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgcgccctc
tRNA gene sequence 
GGGCCTCTAGCTCATGCTTGGTTAGAGCAGCGGACTCATAATCCGTTGGTGCTGGGTTCG
ACTCCCAGGGGGCCCACCa
Downstream region at tRNA end position 
tccaaagaca
Secondary structure (Cloverleaf model)
>CL00007	Met	CAT
                   c      ACCa tccaaagaca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G          T C
                    T     G A C C C     A
    C G T A        A      | | | | |     G
  T         C T C G       C T G G G     C
  T         | | | |                 T T
  G         G A G C
    G T T A        A     TGGTG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T *
intron: position=37, length=205 (in A-loop)
ATTTCGATGTGCCTTGCGCCGGGAAACCACGCAAGGGATGGTGTCAAATTCGGCGAAACCTAAGCGCCCG
CCCGGGCGTATGGCAACGCCGAGCCAAGCTTCGGCGCCTGCGCCGATGAAGGTGTAGAGACTAGACGGCA
CCCACCTAAGGCAAACGCTATGGTGAAGGCATAGTCCAGGGAGTGGCGAAAGTCACACAAACCGG
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK