The detailed information of tRNA gene sequence


Sequence ID>CL00023
Genome IDAE017355
Search identical group
Phylum/ClassBacillota
Species[Bacillus thuringiensis] serovar konkukian str. 97-27 [AE017355]
Start position on genome 4280197
End posion on genome 4279832
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cccgctccaT
tRNA gene sequence 
GTCCCAGTAGCTCAGCAGGATAGAGCAACGGCCTTCTAAGCCGTCGGTCGGGAGTTCGAA
TCTCTCCTGGGACGCTA
Downstream region at tRNA end position 
Acaaaacctt
Secondary structure (Cloverleaf model)
>CL00023	Arg	TCT
                   T      GCTA Acaaaacctt
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | + | | |     G
    A       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T*C T
intron: position=35, length=287 (in A-loop)
CAAGAAAAATAGGAGCCTTTATAGGGAAACAAGAACCTATAAAGTGGACGACACTATATCGGTGAAGCCT
TAACAGTTCGGCTGATGGTAATACCGAGGAAACTTACGATCTTGAAAAAGATTAAGGAGTTTTGAATGAT
TAAGTGAAACTTAATGGTAAAGACTCTGAAGTATGATGAAAATCATCGTGAGGTTCCGTAGAGACTACAC
GTGTCGCACCTGAAATGGTGAAGATATAGTCCAGACTACAAACAGTAATTGCTGGTAGCGAAAGCTATGG
TGGTAAG
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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