The detailed information of tRNA gene sequence


Sequence ID>CL00026
Genome IDCP000555
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesMethylibium petroleiphilum PM1 [CP000555]
Start position on genome 1402642
End posion on genome 1402973
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
atccgctcgg
tRNA gene sequence 
GCCTCGATGGCGAAATTGGCAGACGCAGCGGACTTAAAATCCGCCGGACCCTGACCGGTC
CATCCCGGTTCGATCCCGGGTCGAGGCACCc
Downstream region at tRNA end position 
cgagccccct
Secondary structure (Cloverleaf model)
>CL00026	Leu	TAA
                   g      ACCc cgagccccct
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T          C T
                    T     G G G C C     A
      T A A        G      | | | | |     G
    T       A G C G       C C C G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     CGGACCCTGACCGGTCCAT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=241 (in A-loop)
GAAATCAATTTGAGCGCCCGCGCGGAAACGCGCGGGATGAATCCCGTCAAATTCGGAGAACCCCCTGCGG
TGCGTTACGCATCGCGAGGCAACGCCGAGCCAAGCCGCAGCCGGGCCGGGGCGGAAGGTGTAGAGAGCGG
ACGGCGGGCACCTAAGGCGCAAGCGATGGTGAAGGCGCGCTCCAGACCCCGAACGCGTACAGCGCTGGCT
GCGCGCGGCGGCGAAAGCCGTAGCAGGTAAG
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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