The detailed information of tRNA gene sequence


Sequence ID>CL00036
Genome IDCP000116
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesThiobacillus denitrificans ATCC 25259 [CP000116]
Start position on genome 772361
End posion on genome 772054
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccccgcccaC
tRNA gene sequence 
GGAAGGTTGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCAACGTCGCAAGGCGT
TCGTGGGTTCGAATCCCACACCTTCCGCCA
Downstream region at tRNA end position 
Cccctcgagt
Secondary structure (Cloverleaf model)
>CL00036	Ser	TGA
                   C      GCCA Cccctcgagt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAACGTCGCAAGGCGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T*G A
intron: position=35, length=216 (in A-loop)
GTTCGATCGAGCGCTGCTGTGGAAACGCAGCAGATGTAAGGAGTCAAAGTCGGCGGACCCCCTGGAAACC
CGAGGCAACGCCGAGCGAAGCGTGGTCGACACCATGAACGTGTAGAGACTTGACGGCTCCCGCCTAAGGC
CGAACGGCTAAGGCGAAGGCAAAGTCCAGACTCTCAAACAGCCCGCCGGGCTGGTGGCGAAAGCCATAGG
AGTAAG
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK