The detailed information of tRNA gene sequence


Sequence ID>w028137
Genome IDABCU01000001
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorreliella afzelii ACA-1 [ABCU]
Start position on genome 42166
End posion on genome 42258
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taatactgta
tRNA gene sequence 
GGAGAGATGCCAGAGTGGCCGAATGGGGCTTCCTGCTAAGAAGTTGTCCTTTTAAAAAGG
GGACCATGGGTTCGAATCCCATTCTCTCCGTAA
Downstream region at tRNA end position 
ttatttaaat
Secondary structure (Cloverleaf model)
>w028137	Ser	GCT
                   a      GTAA ttatttaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       A T G G G     C
    G         | | |                 T T
    C       A T G G
      C G A        G     TGTCCTTTTAAAAAGGGGACC
                    G + T
                    C - G
                    T - A
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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