The detailed information of tRNA gene sequence


Sequence ID>w028103
Genome IDABCS01000184
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 5498
End posion on genome 5426
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
attcaactcc
tRNA gene sequence 
GGGCTCGTAGCTCAGTTGGTAGAGCAGCGGACTTTTAATCCGCTGGCCGTAGGTTCGAGT
CCTACCGGGCTCAtca
Downstream region at tRNA end position 
gcaaaaactc
Secondary structure (Cloverleaf model)
>w028103	Lys	TTT
                   c      Atca gcaaaaactc
                     G - C
                     G + T
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGCC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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