The detailed information of tRNA gene sequence


Sequence ID>w028102
Genome IDABCS01000184
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 5580
End posion on genome 5505
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
catccctagc
tRNA gene sequence 
GACCCCTTCGTCCAGAGGCCTAGGACACCGGCCTTTCACGCCGGCGACACGGGTTCGAAT
CCCGTAGGGGTCATTC
Downstream region at tRNA end position 
aactccgggc
Secondary structure (Cloverleaf model)
>w028102	Glu	TTC
                   c      ATTC aactccgggc
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T G C C C     A
      A G A        C      | | | | |     G
    G       C C T G       A C G G G     C
    G       | | | |                 T T
    C       G G A C
      C T A        A     CGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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