The detailed information of tRNA gene sequence


Sequence ID>w028100
Genome IDABCS01000138
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 21163
End posion on genome 21241
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cgcggcgttT
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTAGCGCGCCTGCTTTGGGTGCAGGAAGCCGAAGGTTCGAA
TCCTTTCGCCCCGATTC
Downstream region at tRNA end position 
Ttttgcgctc
Secondary structure (Cloverleaf model)
>w028100	Pro	TGG
                   T      ATTC Ttttgcgctc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T T T C C     A
      T G A        G      + | | | |     G
    C       C G C G       G A A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AAGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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