The detailed information of tRNA gene sequence


Sequence ID>w028096
Genome IDABCS01000108
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 13436
End posion on genome 13511
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cggaccccag
tRNA gene sequence 
GGGGGCATAGCTCAGTTGGGAGAGCATCGCACTGGCAGTGCGAAGGTCAGGAGTTCAAGT
CTCCTTGCCTCCATCC
Downstream region at tRNA end position 
cctaaaacgc
Secondary structure (Cloverleaf model)
>w028096	Ala	GGC
                   g      ATCC cctaaaacgc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     T C C T C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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