The detailed information of tRNA gene sequence


Sequence ID>w028095
Genome IDABCS01000105
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 21755
End posion on genome 21680
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccacacgcaT
tRNA gene sequence 
GCCGCATTGGTGTAATGGTAACACACGGGATTGTCTATCCAGTACCGGGGGTTCGATTCC
CCCATGTGGCGCTC
Downstream region at tRNA end position 
Ggcttcggcc
Secondary structure (Cloverleaf model)
>w028095	Asp	GTC
                   T      GCTC Ggcttcggcc
                     G - C
                     C - G
                     C - G
                     G + T
                     C - G
                     A - T
                     T - A          T T
                    T     C C C C C     A
        A A        G      | | | | |     G
      T     T G T G       G G G G G     C
      G     | | | |                 T T
      G     A C A C
        T A        A     TACC
                    C - G
                    G   A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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