The detailed information of tRNA gene sequence


Sequence ID>w028094
Genome IDABCS01000105
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 21895
End posion on genome 21824
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gacacatctc
tRNA gene sequence 
GCTGACGAAGCTCAGAGGCAGAGCACCGCTGTGGTAAGGCGGAGGCCACGGGTTCGAGTC
CCGTCGTCAGCTtca
Downstream region at tRNA end position 
cgaacgcgcg
Secondary structure (Cloverleaf model)
>w028094	Thr	GGT
                   c      Ttca cgaacgcgcg
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    A     T G C C C     A
        G A        A      | | | | |     G
      A     C T C G       A C G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  G       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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