The detailed information of tRNA gene sequence


Sequence ID>w028092
Genome IDABCS01000098
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 8763
End posion on genome 8689
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
cgggacccgt
tRNA gene sequence 
TGGGGAGTAGCTCAGCTGGCTGGTAGCACCGGGCTTTGAACTCGGCGGTCGTGGGTTCGA
GTCCCACCTCCCCATtca
Downstream region at tRNA end position 
cacaatcaat
Secondary structure (Cloverleaf model)
>w028092	Gln	TTG
                   t      Ttca cacaatcaat
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C A C C C     A
    T C G A        A      | | | | |     G
  G         C T C G       G T G G G     C
  G           | | |                 T T
  C         T A G C
    T G G          A     CGGTC
                    C - G
                    C - G
                    G - C
                    G + T
                    G - C
                  C       A
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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