The detailed information of tRNA gene sequence


Sequence ID>w028087
Genome IDABCS01000070
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 15357
End posion on genome 15282
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agctcgacgc
tRNA gene sequence 
GGCGAGGTAGCACAGTGGACGATGCGCCGCACTCATCCTGCGGAGGACGTCGGTTCGAAC
CCGACTCTCGCCTGTC
Downstream region at tRNA end position 
gacccgctac
Secondary structure (Cloverleaf model)
>w028087	Met	CAT
                   c      TGTC gacccgctac
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          C A
                    T     C A G C C     A
      T G A        A      | | | | |     G
    G       C A C G       G T C G G     C
    G         | | |                 T T
    A       A T G C
      C G          G     AGGAC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       C
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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