The detailed information of tRNA gene sequence


Sequence ID>w028086
Genome IDABCS01000069
Search identical group
Phylum/ClassMyxococcota
SpeciesPlesiocystis pacifica SIR-1 [ABCS]
Start position on genome 6708
End posion on genome 6783
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caattggtcg
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGGAGAGCGCGGGCTTTGCATGCCTGAGGTCAGCGGTTCGATC
CCGCTATCCTCCATCA
Downstream region at tRNA end position 
cgctcctcga
Secondary structure (Cloverleaf model)
>w028086	Ala	TGC
                   g      ATCA cgctcctcga
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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